How ancient organic molecules produced life?December 19th, 2008 - 5:53 pm ICT by IANS
Washington, Dec 19 (IANS) A simple experiment helped researchers provide some clues to one of biology’s most complex questions: how ancient organic molecules came together to form the basis of life. It demonstrated how ancient RNA joined together to reach a biologically relevant length. RNA, the single-stranded precursor to DNA, normally expands one nucleic base at a time, growing sequentially like a linked chain.
The problem is that in the primordial world RNA molecules didn’t have enzymes to catalyse this reaction, and while RNA growth can proceed naturally, the rate would be so slow the RNA could never get more than a few pieces long (for as nucleic bases attach to one end, they can also drop off the other).
Ernesto Di Mauro and colleagues at the University of Rome examined if there was some mechanism to overcome this thermodynamic barrier, by incubating short RNA fragments in water of different temperatures and pH (acidity levels).
They found that under favourable conditions (acidic environment and temperature lower than 70 degrees Celsius), pieces ranging from 10-24 in length could naturally fuse into larger fragments, generally within 14 hours, said a Rome release.
The RNA fragments came together as double-stranded structures then joined at the ends. The fragments did not have to be the same size, but the efficiency of the reactions was dependent on fragment size (larger is better, though efficiency drops again after reaching around 100) and the similarity of the fragment sequences.
The researchers noted that this spontaneous fusing, or ligation, would be a simple way for RNA to overcome initial barriers to growth and reach a biologically important size; at around 100 bases long, RNA molecules can begin to fold into functional, 3D shapes.
This study appeared online in the Journal for Biochemisty.