Novel approach for rapid detection of unknown food pathogens
October 16th, 2010 - 3:02 pm ICT by ANIWashington, Oct 16 (ANI): Scientists have developed a novel approach to automated detection and classification of harmful bacteria in food.
Researchers from the School of Science at Indiana University-Purdue University Indianapolis (IUPUI) and the Bindley Bioscience Center at Purdue University have designed and implemented a sophisticated statistical approach that allows computers to improve their ability to detect the presence of bacterial contamination in tested samples.
These formulas propel machine-learning, enabling the identification of known and unknown classes of food pathogens.
“The sheer number of existing bacterial pathogens and their high mutation rate makes it extremely difficult to automate their detection,” said M. Murat Dundar, Ph.D., assistant professor of computer science in the School of Science at IUPUI and the university’s principal investigator of the study.
“There are thousands of different bacteria subtypes and you can’t collect enough subsets to add to a computer’s memory so it can identify them when it sees them in the future. Unless we enable our equipment to modify detection and identification based on what it has already seen, we may miss discovering isolated or even major outbreaks.”
To detect and identify colonies of pathogens such as listeria, staphylococcus, salmonella, vibrio and E. coli based on the optical properties of their colonies, the researchers used a prototype laser scanner, developed by Purdue University researchers.
Without the new enhanced machine-learning approach, the light-scattering sensor used for classification of bacteria is unable to detect classes of pathogens not explicitly programmed into the system’s identification procedure.
“We are very excited because this new machine-learning approach is a major step towards a fully automated identification of known and emerging pathogens in real time, hopefully circumventing full-blown, food-borne illness outbreaks in the near future,” said Dundar.
The study appears in the October issue of the journal Statistical Analysis and Data Mining. (ANI)
- Laser technology to help track E. coli - Jan 15, 2011
- Researchers create a living neon sign - Dec 20, 2011
- Diabetes drug may retard growth of cysts in polycystic kidney disease - Nov 12, 2010
- Deadly tool in Salmonella's bag of tricks identified - Feb 04, 2011
- Salmonella bugs could prevent food poisoning - Apr 13, 2012
- Scientists tap baby brainpower for smarter computers - Mar 25, 2012
- Gene used by bacteria to breach plant defences identified - Mar 04, 2011
- Deadly bugs lurk in raw vegetables - Aug 16, 2011
- Contaminated liquid soap can leave deadly bugs on your hands - May 03, 2011
- Google GPS, gene sequencing combo tracks typhoid outbreaks - Oct 17, 2011
- 'Walking' properties of bacteria discovered - Oct 08, 2010
- Nano-based biosensor may allow early detection of cancer cells, pathogens - Mar 30, 2011
- How plants fight diseases - Mar 29, 2011
- A machine that can tell when you're lying - Mar 27, 2012
- Prebiotic helps lower colon cancer risk: study - May 04, 2012
Tags: bacterial contamination, bacterial pathogens, bioscience center, classification of bacteria, dundar, food borne illness, food pathogens, food researchers, harmful bacteria, illness outbreaks, indiana university purdue, iupui, laser scanner, mutation rate, novel approach, purdue university indianapolis, purdue university researchers, rapid detection, statistical approach, vibrio